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1

Mitochondrial DNA reveals multiple introductions of domestic chicken in East Africa

J.M. Mwacharo, G. Bjørnstad, V. Mobegi, K. Nomura, H. Hanada, T. Amano, H. Jianlin, O. Hanotte

Journal:

Molecular Phylogenetics and Evolution

Year:

2011

Language:

english

File:

PDF, 1.23 MB

english, 2011

2

Invited review: Genomic selection for small ruminants in developed countries: how applicable for the rest of the world?

Mrode, R., Tarekegn, G. M., Mwacharo, J. M., Djikeng, A.

Journal:

Year:

2018

Language:

english

File:

PDF, 133 KB

english, 2018

3

The small East African shorthorn zebu cows in Kenya. I: Linear body measurements

J. M. Mwacharo, A. M. Okeyo, G. K. Kamande, J. E. O. Rege

Journal:

Tropical Animal Health and Production

Year:

2006

Language:

english

File:

PDF, 256 KB

english, 2006

4

The History of African Village Chickens: an Archaeological and Molecular Perspective

J. M. Mwacharo,G. Bjørnstad,J. L. Han,O. Hanotte

Journal:

African Archaeological Review

Year:

2013

File:

PDF, 514 KB

2013

5

Historical demographic profiles and genetic variation of the East African Butana and Kenana indigenous dairy zebu cattle

Salim, Bashir, Taha, Khalid M., Hanotte, Olivier, Mwacharo, Joram M.

Journal:

Animal Genetics

Year:

2014

Language:

english

File:

PDF, 491 KB

english, 2014

6

Ancient and modern DNA reveal dynamics of domestication and cross-continental dispersal of the dromedary

Almathen, Faisal, Charruau, Pauline, Mohandesan, Elmira, Mwacharo, Joram M., Orozco-terWengel, Pablo, Pitt, Daniel, Abdussamad, Abdussamad M., Uerpmann, Margarethe, Uerpmann, Hans-Peter, De Cupere, Be

Journal:

Proceedings of the National Academy of Sciences

Year:

2016

Language:

english

File:

PDF, 1.02 MB

english, 2016

7

Mitochondrial DNA D-loop haplogroup contributions to the genetic diversity of East European domestic chickens from Russia

Dyomin, A.G., Danilova, M.I., Mwacharo, J.M., Masharsky, A.E., Panteleev, A.V., Druzhkova, A.S., Trifonov, V.A., Galkina, S.A.

Journal:

Journal of Animal Breeding and Genetics

Year:

2017

Language:

english

File:

PDF, 483 KB

english, 2017

8

Polymorphisms in MC1R and ASIP genes are associated with coat colour variation in the Arabian camel

Almathen, Faisal, Elbir, Haitham, Bahbahani, Hussain, Mwacharo, Joram, Hanotte, Olivier

Journal:

Journal of Heredity

Year:

2018

Language:

english

File:

PDF, 15.69 MB

english, 2018

9

Population structure, genetic diversity and selection signatures within seven indigenous Pakistani goat populations

Kumar, C., Song, S., Dewani, P., Kumar, M., Parkash, O., Ma, Y., Malhi, K. K., Yang, N., Mwacharo, J. M., He, X., Jiang, L.

Journal:

Animal Genetics

Year:

2018

Language:

english

File:

PDF, 1.33 MB

english, 2018

10

Detection of Toxoplasma gondii infection in semen of rams used for natural mating in commercial sheep farms in Tunisia

Rouatbi, Mariem, Amairia, Safa, Lahmer, Mustapha, Lassoued, Narjess, Rekik, Mourad, Wieland, Barbara, Mwacharo, Joram M., Gharbi, Mohamed

Journal:

Veterinary Parasitology: Regional Studies and Reports

Year:

2019

File:

PDF, 2.19 MB

2019

11

The wild species genome ancestry of domestic chickens

Lawal, Raman Akinyanju, Martin, Simon H., Vanmechelen, Koen, Vereijken, Addie, Silva, Pradeepa, Al-Atiyat, Raed Mahmoud, Aljumaah, Riyadh Salah, Mwacharo, Joram M., Wu, Dong-Dong, Zhang, Ya-Ping, Hock

Journal:

Year:

2020

File:

PDF, 3.08 MB

2020

12

Community-based sheep breeding programs generated substantial genetic gains and socioeconomic benefits

Haile, A., Getachew, T., Mirkena, T., Duguma, G., Gizaw, S., Wurzinger, M., Soelkner, J., Mwai, O., Dessie, T., Abebe, A., Abate, Z., Jembere, T., Rekik, M., Lobo, R. N. B., Mwacharo, J. M., Terfa, Z.

Journal:

Year:

2020

File:

PDF, 532 KB

2020

13

Alternating vector immunizations encoding pre-erythrocytic malaria antigens enhance memory responses in a malaria endemic area

Philip Bejon, Oscar K. Kai, Jedidah Mwacharo, Sheila Keating, Trudie Lang, Sarah C. Gilbert, Norbert Peshu, Kevin Marsh, Adrian V S Hill

Journal:

European Journal of Immunology

Year:

2006

Language:

english

File:

PDF, 269 KB

english, 2006

14

Production Objectives and Management Strategies of Livestock Keepers in South-East Kenya: Implications for a Breeding Programme

J. M. Mwacharo, A. G. Drucker

Journal:

Tropical Animal Health and Production

Year:

2005

Language:

english

File:

PDF, 141 KB

english, 2005

15

Genetic relationships among Kenyan and other East African indigenous chickens

J. M. Mwacharo, K. Nomura, H. Hanada, H. Jianlin, O. Hanotte, T. Amano

Journal:

Animal Genetics

Year:

2007

Language:

english

File:

PDF, 168 KB

english, 2007

16

East Asian contributions to Dutch traditional and western commercial chickens inferred from mtDNA analysis

N. Dana, H.-J. Megens, R. P. M. A. Crooijmans, O. Hanotte, J. Mwacharo, M. A. M. Groenen, J. A. M. van Arendonk

Journal:

Animal Genetics

Year:

2011

Language:

english

File:

PDF, 470 KB

english, 2011

17

Co-inheritance of α+-thalassaemia and sickle trait results in specific effects on haematological parameters

Sammy Wambua, Jedidah Mwacharo, Sophie Uyoga, Alexander Macharia, Thomas N. Williams

Journal:

British Journal of Haematology

Year:

2006

Language:

english

File:

PDF, 82 KB

english, 2006

18

Characterization of Indigenous Fat-tailed and Fat-rumped Hair Sheep in Kenya: Diversity in Blood Proteins

J.M. Mwacharo, C.J. Otieno, A.M. Okeyo, R.A. Aman

Journal:

Tropical Animal Health and Production

Year:

2002

Language:

english

File:

PDF, 251 KB

english, 2002

19

Genetic variations between indigenous fat-tailed sheep populations in Kenya

J.M Mwacharo, C.J Otieno, A.M Okeyo

Journal:

Small Ruminant Research

Year:

2002

Language:

english

File:

PDF, 96 KB

english, 2002

20

Immunogenicity of the candidate malaria vaccines FP9 and modified vaccinia virus Ankara encoding the pre-erythrocytic antigen ME–TRAP in 1–6 year old children in a malaria endemic area

Philip Bejon, Jedidah Mwacharo, Oscar K. Kai, Stephen Todryk, Sheila Keating, Trudie Lang, Sarah C. Gilbert, Norbert Peshu, Kevin Marsh, Adrian V.S. Hill

Journal:

Year:

2006

Language:

english

File:

PDF, 230 KB

english, 2006

21

Prevalence of serum neutralizing antibodies against chimpanzee adenovirus 63 and human adenovirus 5 in Kenyan Children, in the context of vaccine vector efficacy

M. Dudareva, L. Andrews, S.C. Gilbert, P. Bejon, K. Marsh, J. Mwacharo, O. Kai, A. Nicosia, A.V.S. Hill

Journal:

Year:

2009

Language:

english

File:

PDF, 218 KB

english, 2009

22

Micro- and minisatellite-expressed sequence tag (EST) markers discriminate between populations of Rhipicephalus appendiculatus

Esther G. Kanduma, Joram M. Mwacharo, Jack D. Sunter, Inosters Nzuki, Stephen Mwaura, Peter W. Kinyanjui, Michael Kibe, Heloise Heyne, Olivier Hanotte, Robert A. Skilton, Richard P. Bishop

Journal:

Ticks and Tick-borne Diseases

Year:

2012

Language:

english

File:

PDF, 387 KB

english, 2012

23

Reconstructing the origin and dispersal patterns of village chickens across East Africa: insights from autosomal markers

Mwacharo, J. M., Nomura, K., Hanada, H., Han, J. L., Amano, T., Hanotte, O.

Journal:

Molecular Ecology

Year:

2013

Language:

english

File:

PDF, 752 KB

english, 2013

24

Analysis of genome-wide structure, diversity and fine mapping of Mendelian traits in traditional and village chickens

Wragg, D, Mwacharo, J M, Alcalde, J A, Hocking, P M, Hanotte, O

Journal:

Year:

2012

Language:

english

File:

PDF, 840 KB

english, 2012

25

Constraints to effective adoption of innovative livestock production technologies in the Rift Valley (Kenya)

Zander, Kerstin K., Mwacharo, Joram M., Drucker, Adam G., Garnett, Stephen T.

Journal:

Journal of Arid Environments

Year:

2013

Language:

english

File:

PDF, 1.08 MB

english, 2013

26

Insights into the genetic history of Green-legged Partridgelike fowl: mtDNA and genome-wide SNP analysis

Siwek, M., Wragg, D., Sławińska, A., Malek, M., Hanotte, O., Mwacharo, J. M.

Journal:

Animal Blood Groups and Biochemical Genetics =Animal Genetics (Wiley)

Year:

2013

Language:

english

File:

PDF, 594 KB

english, 2013

27

Chronic Exposure to Plasmodium falciparum Is Associated with Phenotypic Evidence of B and T Cell Exhaustion

Illingworth, J., Butler, N. S., Roetynck, S., Mwacharo, J., Pierce, S. K., Bejon, P., Crompton, P. D., Marsh, K., Ndungu, F. M.

Journal:

The Journal of Immunology

Year:

2013

Language:

english

File:

PDF, 1.74 MB

english, 2013

28

On-farm characterization of the indigenous small East African Shorthorn Zebu cattle (SEAZ) in the Southeast rangelands of Kenya

Mwacharo, J.M., Rege, J.E.O.

Journal:

Animal Genetic Resources Information

Year:

2002

File:

PDF, 172 KB

2002

29

The Induction and Persistence of T Cell IFN- Responses after Vaccination or Natural Exposure Is Suppressed by Plasmodium falciparum

Bejon, P., Mwacharo, J., Kai, O., Todryk, S., Keating, S., Lowe, B., Lang, T., Mwangi, T. W., Gilbert, S. C., Peshu, N., Marsh, K., Hill, A. V. S.

Journal:

The Journal of Immunology

Year:

2007

Language:

english

File:

PDF, 739 KB

english, 2007

30

Prime-boost vaccination with chimpanzee adenovirus and modified vaccinia Ankara encoding TRAP provides partial protection against Plasmodium falciparum infection in Kenyan adults

Ogwang, C., Kimani, D., Edwards, N. J., Roberts, R., Mwacharo, J., Bowyer, G., Bliss, C., Hodgson, S. H., Njuguna, P., Viebig, N. K., Nicosia, A., Gitau, E., Douglas, S., Illingworth, J., Marsh, K., L

Journal:

Science Translational Medicine

Year:

2015

Language:

english

File:

PDF, 357 KB

english, 2015

31

Signature of artificial selection and ecological landscape on morphological structures of Ethiopian village chickens

Desta, T.T., Dessie, T., Bettridge, J., Lynch, S.E., Melese, K., Collins, M., Christley, R.M., Wigley, P., Kaiser, P., Terfa, Z., Mwacharo, J.M., Hanotte, O.

Journal:

Animal Genetic Resources/Ressources génétiques animales/Recursos genéticos animales

Year:

2013

File:

PDF, 1.10 MB

2013

32

Memory B cells are a more reliable archive for historical antimalarial responses than plasma antibodies in no-longer exposed children

Ndungu, F. M., Olotu, A., Mwacharo, J., Nyonda, M., Apfeld, J., Mramba, L. K., Fegan, G. W., Bejon, P., Marsh, K.

Journal:

Proceedings of the National Academy of Sciences

Year:

2012

Language:

english

File:

PDF, 397 KB

english, 2012

33

Early Gamma Interferon and Interleukin-2 Responses to Vaccination Predict the Late Resting Memory in Malaria-Naive and Malaria-Exposed Individuals

Bejon, P., Keating, S., Mwacharo, J., Kai, O. K., Dunachie, S., Walther, M., Berthoud, T., Lang, T., Epstein, J., Carucci, D., Moris, P., Cohen, J., Gilbert, S. C., Peshu, N., Marsh, K., Hill, A. V. S

Journal:

Infection and Immunity

Year:

2006

Language:

english

File:

PDF, 208 KB

english, 2006

34

A Phase 2b Randomised Trial of the Candidate Malaria Vaccines FP9 ME-TRAP and MVA ME-TRAP among Children in Kenya

Bejon, Philip, Mwacharo, Jedidah, Kai, Oscar, Mwangi, Tabitha, Milligan, Paul, Todryk, Stephen, Keating, Sheila, Lang, Trudie, Lowe, Brett, Gikonyo, Caroline, Molyneux, Catherine, Fegan, Greg, Gilbert

Journal:

PLoS Clinical Trials

Year:

2006

Language:

english

File:

PDF, 839 KB

english, 2006

35

Effect of the Pre-erythrocytic Candidate Malaria Vaccine RTS,S/AS01E on Blood Stage Immunity in Young Children

Bejon, P., Cook, J., Bergmann-Leitner, E., Olotu, A., Lusingu, J., Mwacharo, J., Vekemans, J., Njuguna, P., Leach, A., Lievens, M., Dutta, S., von Seidlein, L., Savarese, B., Villafana, T., Lemnge, M.

Journal:

The Journal of Infectious Diseases

Year:

2011

Language:

english

File:

PDF, 519 KB

english, 2011

36

Multiple genomic signatures of selection in goats and sheep indigenous to a hot arid environment

Kim, E-S, Elbeltagy, A R, Aboul-Naga, A M, Rischkowsky, B, Sayre, B, Mwacharo, J M, Rothschild, M F

Journal:

Year:

2015

Language:

english

File:

PDF, 1.76 MB

english, 2015

37

Multi-locus genotyping reveals absence of genetic structure in field populations of the brown ear tick (Rhipicephalus appendiculatus) in Kenya

Kanduma, Esther G., Mwacharo, Joram M., Mwaura, Stephen, Njuguna, Joyce N., Nzuki, Inosters, Kinyanjui, Peter W., Githaka, Naftaly, Heyne, Heloise, Hanotte, Olivier, Skilton, Robert A., Bishop, Richar

Journal:

Ticks and Tick-borne Diseases

Year:

2016

Language:

english

File:

PDF, 1.74 MB

english, 2016

38

Genetic diversity and structure in Egyptian indigenous sheep populations mirror patterns of anthropological interactions

Elbeltagy, A.R., Aboul-Naga, A.M., Hassen, H., Rischkowsky, B., Mwacharo, J.M.

Journal:

Small Ruminant Research

Year:

2015

Language:

english

File:

PDF, 793 KB

english, 2015

39

Genome-wide analysis reveals the extent of EAV-HP integration in domestic chicken

Wragg, David, Mason, Andrew S., Yu, Le, Kuo, Richard, Lawal, Raman A., Desta, Takele Taye, Mwacharo, Joram M., Cho, Chang-Yeon, Kemp, Steve, Burt, David W., Hanotte, Olivier

Journal:

Year:

2015

Language:

english

File:

PDF, 1.95 MB

english, 2015

40

Special Issue: Animal Genetics and African Archaeology || The History of African Village Chickens: an Archaeological and Molecular Perspective

J. M. Mwacharo, G. Bjørnstad, J. L. Han and O. Hanotte

Journal:

African Archaeological Review

Year:

2013

Language:

english

File:

PDF, 1.81 MB

english, 2013

41

Analyses of mitochondrial genes reveal two sympatric but genetically divergent lineages of Rhipicephalus appendiculatus in Kenya

Kanduma, Esther G., Mwacharo, Joram M., Githaka, Naftaly W., Kinyanjui, Peter W., Njuguna, Joyce N., Kamau, Lucy M., Kariuki, Edward, Mwaura, Stephen, Skilton, Robert A., Bishop, Richard P.

Journal:

Parasites & Vectors

Year:

2016

Language:

english

File:

PDF, 920 KB

english, 2016

42

Genomic footprints of dryland stress adaptation in Egyptian fat-tail sheep and their divergence from East African and western Asia cohorts

Mwacharo, Joram M., Kim, Eui-Soo, Elbeltagy, Ahmed R., Aboul-Naga, Adel M., Rischkowsky, Barbara A., Rothschild, Max F.

Journal:

Scientific Reports

Year:

2017

Language:

english

File:

PDF, 1.15 MB

english, 2017

43

Detecting Malaria Hotspots: A Comparison of Rapid Diagnostic Test, Microscopy, and Polymerase Chain Reaction

Mogeni, Polycarp, Williams, Thomas N, Omedo, Irene, Kimani, Domtila, Ngoi, Joyce M, Mwacharo, Jedida, Morter, Richard, Nyundo, Christopher, Wambua, Juliana, Nyangweso, George, Kapulu, Melissa, Fegan,

Journal:

The Journal of Infectious Diseases

Year:

2017

Language:

english

File:

PDF, 1.40 MB

english, 2017

44

Genetic diversity and population structure of Theileria parva in South Sudan

Salih, Diaeldin A., Mwacharo, Joram M., Pelle, Roger, Njahira, Moses N., Odongo, David O., Mbole-Kariuki, Mary N., Marcellino, Wani L., Malak, Agol K., Kiara, Henary, El Hussein, Abdel Rahim M., Bisho

Journal:

Ticks and Tick-borne Diseases

Year:

2018

Language:

english

File:

PDF, 613 KB

english, 2018

45

S0124 Indigenous stocks as treasure troves for sustainable livestock production in the 21st century: Insights from small ruminant genomics

Mwacharo, J. M., Elbeltagy, A. R., Kim, E. S., Haile, A., Rischkowsky, B., Rothschild, M. F.

Journal:

Journal of Animal Science

Year:

2016

Language:

english

File:

PDF, 208 KB

english, 2016

46

The Effect of α +-Thalassaemia on the Incidence of Malaria and Other Diseases in Children Living on the Coast of Kenya

Wambua, Sammy, Mwangi, Tabitha W, Kortok, Moses, Uyoga, Sophie M, Macharia, Alex W, Mwacharo, Jedidah K, Weatherall, David J, Snow, Robert W, Marsh, Kevin, Williams, Thomas N, Pasvol, Geoffrey

Journal:

Year:

2006

Language:

english

File:

PDF, 197 KB

english, 2006

47

Quantitative PCR Evaluation of Cellular Immune Responses in Kenyan Children Vaccinated with a Candidate Malaria Vaccine

Mwacharo, Jedidah, Dunachie, Susanna J., Kai, Oscar, Hill, Adrian V. S., Bejon, Philip, Fletcher, Helen A., Moorthy, Vasee

Journal:

Year:

2009

Language:

english

File:

PDF, 441 KB

english, 2009

48

Endogenous Retrovirus EAV-HP Linked to Blue Egg Phenotype in Mapuche Fowl

Wragg, David, Mwacharo, Joram M., Alcalde, José A., Wang, Chen, Han, Jian-Lin, Gongora, Jaime, Gourichon, David, Tixier-Boichard, Michèle, Hanotte, Olivier, Kozak, Christine A.

Journal:

Year:

2013

Language:

english

File:

PDF, 1.62 MB

english, 2013

49

Whole-Genome Resequencing of Red Junglefowl and Indigenous Village Chicken Reveal New Insights on the Genome Dynamics of the Species

Lawal, Raman A., Al-Atiyat, Raed M., Aljumaah, Riyadh S., Silva, Pradeepa, Mwacharo, Joram M., Hanotte, Olivier

Journal:

Frontiers in Genetics

Year:

2018

Language:

english

File:

PDF, 4.20 MB

english, 2018

50

P5004 Identification of signatures of selection and assessing the diversity of East African Shorthorn Zebu mitochondrial DNA

Bahbahani, H., Mwacharo, J., Hanotte, O.

Journal:

Journal of Animal Science

Year:

2016

Language:

english

File:

PDF, 237 KB

english, 2016

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